]> Pileus Git - ~andy/sunrise/commitdiff
sci-biology/blat: version bump!
authorazazello <gentoo@horizon.ath.cx>
Mon, 30 Apr 2007 16:38:08 +0000 (16:38 +0000)
committerazazello <gentoo@horizon.ath.cx>
Mon, 30 Apr 2007 16:38:08 +0000 (16:38 +0000)
svn path=/sunrise/; revision=3561

sci-biology/blat/ChangeLog
sci-biology/blat/Manifest
sci-biology/blat/blat-34.ebuild [new file with mode: 0644]

index 6ee597cbcd28cbaba065316fdedf83c9f308486a..a82dced67ca5fdb5728a0f4abea523a8d2e88d62 100644 (file)
@@ -2,6 +2,9 @@
 # Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  30 Apr 2007; AK <gentoo@horizon.ath.cx> +blat-34.ebuild:
+  version bump!
+
   05 Oct 2006; Markus Ullmann <jokey@gentoo.org> blat-33.ebuild:
   Small QA
 
index 84e449264a2d6964eaaff0e7fcf06a5e0bb2eac7..9d8d1409710a663f9b04d0611b30ddff9feed98c 100644 (file)
@@ -1,4 +1,6 @@
 DIST blatSrc33.zip 1308517 RMD160 76d7f8f713a5ece72c63eb8852662acf83e2e736 SHA1 a9606455549e2f153ab04321d08e59f60c039dd2 SHA256 4ca932721f529d815e64b51940c94d8136faec52c6b8bf8c3fcd3706337d9a29
+DIST blatSrc34.zip 2142975 RMD160 6c8226305c56ea56504103db6ef401841bc0c6f7 SHA1 4208451b5fa5f6cf30d15afb1df79edc850735db SHA256 b764828fdf8ef4c9994ae4b6148340a776493475edb573b6adf63ae7ca9b2629
 EBUILD blat-33.ebuild 812 RMD160 bcc1c8d50d708410dcc1e9bfd650523806209d6b SHA1 851fb369c0d328c3c1add9b94c66aae24fa66bfa SHA256 c80f630e4df9309dbfc599247a04128605a635cccec1c5ec2bf6b02d0f998b2e
-MISC ChangeLog 594 RMD160 cdf2ca22419b0970b741c01fd3c7418d3d686b5e SHA1 173010880b3b5d2b0dac36e8d8475763cfddeaaf SHA256 f323c463a25c8ef7b159a93f73c43c94ea129511599ac61592b383b3ac7646ca
+EBUILD blat-34.ebuild 887 RMD160 acd8641037ab23c784c54bacf4a8e7213953040d SHA1 e152207366ca8608b75a3c5f921e786938f80576 SHA256 918f6fbc8a6ec60f2eee0c07c0581d0826b02795492f72145bbfab3b0815096e
+MISC ChangeLog 670 RMD160 663d91bf8a6d8b76117629115098055b09ab9e91 SHA1 c135adcfd739b16a79df03edbc902b6be51bae77 SHA256 3ba02c414100ddf286d91b0397bded0eecd03dc2406c3b801449bc89da653aaf
 MISC metadata.xml 170 RMD160 645927a396fdc21cdeb089fe42c5397332420ea6 SHA1 ac7f48a14fec325926f9ce1be8fbf1f311b4f2e4 SHA256 d797a2ec6f9dc516c9f9c1a758ee87ad3e8c43101b5dc76c2f872d5bd4639b42
diff --git a/sci-biology/blat/blat-34.ebuild b/sci-biology/blat/blat-34.ebuild
new file mode 100644 (file)
index 0000000..665fdf9
--- /dev/null
@@ -0,0 +1,33 @@
+# Copyright 1999-2007 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+inherit toolchain-funcs
+
+DESCRIPTION="The BLAST-Like Alignment Tool, a fast genomic sequence aligner"
+LICENSE="blat"
+HOMEPAGE="http://www.cse.ucsc.edu/~kent/"
+SLOT="0"
+IUSE=""
+KEYWORDS="~x86"
+
+SRC_URI="http://www.soe.ucsc.edu/~kent/src/${PN}Src${PV}.zip"
+S="${WORKDIR}/${PN}Src"
+
+DEPEND="app-arch/unzip"
+RDEPEND=""
+
+src_compile() {
+       MACHTYPE=$(tc-arch)
+       if [[ $MACHTYPE == "x86" ]]; then MACHTYPE="i386"; fi
+       sed -i 's/-Werror//; s/CFLAGS=//;' "${S}/inc/common.mk"
+       sed -i 's/\(${STRIP} \)/#\1/' "${S}"/{*/makefile,utils/*/makefile,*/*.mk}
+       mkdir -p "${S}/bin/${MACHTYPE}"
+       emake MACHTYPE="${MACHTYPE}" HOME="${S}" || die "emake failed"
+}
+
+src_install() {
+       MACHTYPE=$(tc-arch)
+       if [[ $MACHTYPE == "x86" ]]; then MACHTYPE="i386"; fi
+       dobin "${S}/bin/${MACHTYPE}/"*
+}