sci-biology/phrap: removed, it is allready in the official tree.

svn path=/sunrise/; revision=7583

diff --git a/sci-biology/phrap/ChangeLog b/sci-biology/phrap/ChangeLog
deleted file mode 100644 (file)
index e5feb6f..0000000
--- a/sci-biology/phrap/ChangeLog
+++ /dev/null
@@ -1,15 +0,0 @@
-# ChangeLog for sci-biology/phrap
-# Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2
-# $Header: $
-
-  25 Apr 2007; Ali Polatel (hawking) <polatel@gmail.com>
-  phrap-0.990329.ebuild:
-  remove trailing whitespace
-
-  22 Apr 2007; AK <gentoo@horizon.ath.cx> phrap-0.990329.ebuild:
-  correct license
-
-  20 Apr 2007; AK <gentoo@horizon.ath.cx> +phrap-0.990329.ebuild,
-  +metadata.xml:
-  new package (bug 114094)
-

diff --git a/sci-biology/phrap/Manifest b/sci-biology/phrap/Manifest
deleted file mode 100644 (file)
index 90873b2..0000000
--- a/sci-biology/phrap/Manifest
+++ /dev/null
@@ -1,4 +0,0 @@
-DIST phrap-distrib.tar.Z 366163 RMD160 f6d15059903868b907df225b9022b47957f4004a SHA1 69d9343d1d3bc7edcab2ebca222370fc9db7b9f7 SHA256 e0be79818e3a8ca17391f42cc0ffbaf1a63299c8845a0b9ac3aaeb3cac641fcc
-EBUILD phrap-0.990329.ebuild 864 RMD160 0da1a54046830d935a83a8cc264f9635e2c20574 SHA1 b2a8944e0c509089bdc4f02e5d9c942286a4b890 SHA256 f241e079fcefa686dc8dbb86a2c41e29eac5bbf52d7dc1a61d0acd4cef1ae39d
-MISC ChangeLog 425 RMD160 c717b9de7bf29f2c8dbc8f4977a1f7bf7a3205f3 SHA1 09f5cb38801edc3fd0ad1a56cc872475c0dc8b43 SHA256 27a3aa529ee753ec4f03ee1781fcdd1903d722290a38ca7a3d33fcd602b5cec2
-MISC metadata.xml 170 RMD160 645927a396fdc21cdeb089fe42c5397332420ea6 SHA1 ac7f48a14fec325926f9ce1be8fbf1f311b4f2e4 SHA256 d797a2ec6f9dc516c9f9c1a758ee87ad3e8c43101b5dc76c2f872d5bd4639b42

diff --git a/sci-biology/phrap/metadata.xml b/sci-biology/phrap/metadata.xml
deleted file mode 100644 (file)
index 7e32869..0000000
--- a/sci-biology/phrap/metadata.xml
+++ /dev/null
@@ -1,5 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-<herd>maintainer-wanted</herd>
-</pkgmetadata>

diff --git a/sci-biology/phrap/phrap-0.990329.ebuild b/sci-biology/phrap/phrap-0.990329.ebuild
deleted file mode 100644 (file)
index eebf65a..0000000
--- a/sci-biology/phrap/phrap-0.990329.ebuild
+++ /dev/null
@@ -1,38 +0,0 @@
-# Copyright 1999-2008 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-DESCRIPTION="Phrap, swat, cross_match: Shotgun assembly and alignment utilities"
-HOMEPAGE="http://www.phrap.org/"
-SRC_URI="phrap-distrib.tar.Z"
-
-LICENSE="phrap"
-SLOT="0"
-KEYWORDS="~x86"
-IUSE=""
-
-DEPEND=""
-RDEPEND=""
-
-S="${WORKDIR}"
-
-RESTRICT="fetch"
-
-pkg_nofetch() {
-       einfo "Please visit http://www.phrap.org/phredphrapconsed.html and obtain the file"
-       einfo '"distrib.tar.Z", then rename it to "phrap-distrib.tar.Z" and put it in'
-       einfo "${DISTDIR}"
-}
-
-src_compile() {
-       sed -i 's/CFLAGS=/#CFLAGS=/' makefile
-       sed -i 's|#!/usr/local/bin/perl|#!/usr/bin/perl|' phrapview
-       emake || die "emake failed"
-}
-
-src_install() {
-       dobin cluster cross_match loco phrap phrapview swat
-       for i in {general,phrap,swat}.doc ; do
-               newdoc ${i} ${i}.txt
-       done
-}