sci-biology/blat: new ebuild: sci-biology/blat-33 (bug 135307)

svn path=/sunrise/; revision=1330

diff --git a/sci-biology/blat/ChangeLog b/sci-biology/blat/ChangeLog
new file mode 100644 (file)
index 0000000..2663953
--- /dev/null
+++ b/sci-biology/blat/ChangeLog
@@ -0,0 +1,12 @@
+# ChangeLog for sci-biology/blat
+# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+  25 Sep 2006; Andrei K. (azazello) <az@horizon.ath.cx> +blat-33.ebuild,
+  +metadata.xml:
+  new ebuild: sci-biology/blat-33 (bug 135307)
+
+  25 Sep 2006; Andrei K. (azazello) <az@horizon.ath.cx> +blat-33.ebuild,
+  +metadata.xml:
+  new ebuild: sci-biology/blat-33 (bug 135307)
+

diff --git a/sci-biology/blat/Manifest b/sci-biology/blat/Manifest
new file mode 100644 (file)
index 0000000..5b1931a
--- /dev/null
+++ b/sci-biology/blat/Manifest
@@ -0,0 +1,16 @@
+DIST blatSrc33.zip 1308517 RMD160 76d7f8f713a5ece72c63eb8852662acf83e2e736 SHA1 a9606455549e2f153ab04321d08e59f60c039dd2 SHA256 4ca932721f529d815e64b51940c94d8136faec52c6b8bf8c3fcd3706337d9a29
+EBUILD blat-33.ebuild 791 RMD160 8d05f7c7d4d5c5b22173b788f1eef8c1860b0703 SHA1 f52683d52b02b75fd1b272b9da993b543c94e612 SHA256 720895fb5448757690ad8a1575daf73acaa75c8a78ee40fda4b9320e7183b7d7
+MD5 17c4eb0e52d3cd91a06bc52e014d9b48 blat-33.ebuild 791
+RMD160 8d05f7c7d4d5c5b22173b788f1eef8c1860b0703 blat-33.ebuild 791
+SHA256 720895fb5448757690ad8a1575daf73acaa75c8a78ee40fda4b9320e7183b7d7 blat-33.ebuild 791
+MISC ChangeLog 393 RMD160 f9b911e5125a41753887f25a27b9b6bd80dec5a8 SHA1 03b061a640802d15497e44e5db15fdfe6d774c0d SHA256 77988784279dc3f7b7362ac9d0037c99bec86c4e5e7e77258dad00ee6936d615
+MD5 11fb4b55e32fc16f632425b03fea9bd2 ChangeLog 393
+RMD160 f9b911e5125a41753887f25a27b9b6bd80dec5a8 ChangeLog 393
+SHA256 77988784279dc3f7b7362ac9d0037c99bec86c4e5e7e77258dad00ee6936d615 ChangeLog 393
+MISC metadata.xml 170 RMD160 645927a396fdc21cdeb089fe42c5397332420ea6 SHA1 ac7f48a14fec325926f9ce1be8fbf1f311b4f2e4 SHA256 d797a2ec6f9dc516c9f9c1a758ee87ad3e8c43101b5dc76c2f872d5bd4639b42
+MD5 1e678929a9fec6632e227bdf2262e9a1 metadata.xml 170
+RMD160 645927a396fdc21cdeb089fe42c5397332420ea6 metadata.xml 170
+SHA256 d797a2ec6f9dc516c9f9c1a758ee87ad3e8c43101b5dc76c2f872d5bd4639b42 metadata.xml 170
+MD5 762700fd66583fb30a2036fddc991c09 files/digest-blat-33 223
+RMD160 2a3f5a14978a209ed44542f37026dea617d025f7 files/digest-blat-33 223
+SHA256 37fda0a57d5990b4467a5d0ff43a26e8b7e4a0a7dca3ccfe4d0138cd69618b32 files/digest-blat-33 223

diff --git a/sci-biology/blat/blat-33.ebuild b/sci-biology/blat/blat-33.ebuild
new file mode 100644 (file)
index 0000000..ce7442a
--- /dev/null
+++ b/sci-biology/blat/blat-33.ebuild
@@ -0,0 +1,31 @@
+# Copyright 1999-2006 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+DESCRIPTION="The BLAST-Like Alignment Tool, a fast genomic sequence aligner"
+LICENSE="blat"
+HOMEPAGE="http://www.cse.ucsc.edu/~kent/"
+SLOT="0"
+IUSE=""
+KEYWORDS="~x86"
+
+SRC_URI="http://www.soe.ucsc.edu/~kent/src/${PN}Src${PV}.zip"
+S="${WORKDIR}/${PN}Src"
+
+DEPEND="app-arch/unzip"
+RDEPEND=""
+
+inherit toolchain-funcs
+
+src_compile() {
+       MACHTYPE=$(tc-arch)
+       if [[ $MACHTYPE == "x86" ]]; then MACHTYPE="i386"; fi
+       sed -i 's/-Werror//; s/CFLAGS=//;' "${S}/inc/common.mk"
+       mkdir -p "${S}/bin/${MACHTYPE}"
+       emake MACHTYPE="${MACHTYPE}" HOME="${S}" || die "emake failed"
+}
+
+src_install() {
+       MACHTYPE="`uname|tr 'A-Z' 'a-z'|sed 's/linux/i386/'`"
+       dobin "${S}/bin/${MACHTYPE}/"*
+}

diff --git a/sci-biology/blat/files/digest-blat-33 b/sci-biology/blat/files/digest-blat-33
new file mode 100644 (file)
index 0000000..c1fe634
--- /dev/null
+++ b/sci-biology/blat/files/digest-blat-33
@@ -0,0 +1,3 @@
+MD5 5f9d3a4a88e57dfc435b5dd465209918 blatSrc33.zip 1308517
+RMD160 76d7f8f713a5ece72c63eb8852662acf83e2e736 blatSrc33.zip 1308517
+SHA256 4ca932721f529d815e64b51940c94d8136faec52c6b8bf8c3fcd3706337d9a29 blatSrc33.zip 1308517

diff --git a/sci-biology/blat/metadata.xml b/sci-biology/blat/metadata.xml
new file mode 100644 (file)
index 0000000..7e32869
--- /dev/null
+++ b/sci-biology/blat/metadata.xml
@@ -0,0 +1,5 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+<herd>maintainer-wanted</herd>
+</pkgmetadata>