Pileus Git - ~andy/sunrise/blob - sci-biology/phrap/phrap-0.990329.ebuild

   1 # Copyright 1999-2007 Gentoo Foundation
   2 # Distributed under the terms of the GNU General Public License v2
   3 # $Header: $
   4
   5 DESCRIPTION="Phrap, swat, cross_match: Shotgun assembly and alignment utilities"
   6 HOMEPAGE="http://www.phrap.org/"
   7 SRC_URI="phrap-distrib.tar.Z"
   8
   9 LICENSE="phrap"
  10 SLOT="0"
  11 KEYWORDS="~x86"
  12 IUSE=""
  13
  14 DEPEND=""
  15 RDEPEND=""
  16
  17 S="${WORKDIR}"
  18
  19 RESTRICT="fetch"
  20
  21 pkg_nofetch() {
  22         einfo "Please visit http://www.phrap.org/phredphrapconsed.html and obtain the file"
  23         einfo '"distrib.tar.Z", then rename it to "phrap-distrib.tar.Z" and put it in'
  24         einfo "${DISTDIR}"
  25 }
  26
  27 src_compile() {
  28         sed -i 's/CFLAGS=/#CFLAGS=/' makefile
  29         sed -i 's|#!/usr/local/bin/perl|#!/usr/bin/perl|' phrapview
  30         emake || die "emake failed"
  31 }
  32
  33 src_install() {
  34         dobin cluster cross_match loco phrap phrapview swat
  35         for i in {general,phrap,swat}.doc ; do
  36                 newdoc ${i} ${i}.txt
  37         done
  38 }